Machine Learning
Group Leaders

Structure of Pillar 2 and of the constellation of tools that will be built to support its key objectives.
Related publications (until January 2025)
- S. Chong, F. Bigi, F. Grasselli, P. Loche, M. Kellner, M. Ceriotti, Prediction rigidities for data-driven chemistry, Faraday Discussions 256, 322 (2025). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - J. B. Holmes, D. Torodii, M. Balodis, M. Cordova, A. Hofstetter, F. Paruzzo, S. O. Nilsson Lill, E. Eriksson, P. Berruyer, B. Simões de Almeida, M. Quayle, S. Norberg, A. S. Ankarberg, S. Schantz, L. Emsley, Atomic-level structure of the amorphous drug atuliflapon via NMR crystallography, Faraday Discussions 255, 342 (2025). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Emsley / Project(s): P2 - W. B. How, S. Chong, F. Grasselli, K. K. Huguenin-Dumittan, M. Ceriotti, Adaptive energy reference for machine-learning models of the electronic density of states, Physical Review Materials 9, 013802 (2025). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - D. Torodii, J. B. Holmes, P. Moutzouri, S. O. Nilsson Lill, M. Cordova, A. C. Pinon, K. Grohe, S. Wegner, O. D. Putra, S. Norberg, A. Welinder, S. Schantz, L. Emsley, Crystal structure validation of verinurad via proton-detected ultra-fast MAS NMR and machine learning, Faraday Discussions 255, 143 (2025). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Emsley / Project(s): P2 - J. Van Herck, M. V. Gil, K. M. Jablonka, A. Abrudan, A. S. Anker, M. Asgari, B. Blaiszik, A. Buffo, L. Choudhury, C. Corminboeuf, H. Daglar, A. M. Elahi, I. T. Foster, S. Garcia, M. Garvin, G. Godin, L. L. Good, J. Gu, N. Xiao Hu, X. Jin, T. Junkers, S. Keskin, T. P. J. Knowles, R. Laplaza, M. Lessona, S. Majumdar, H. Mashhadimoslem, R. D. Mcintosh, S. M. Moosavi, B. Mouriño, F. Nerli, C. Pevida, N. Poudineh, M. Rajabi-Kochi, K. L. Saar, F. Hooriabad Saboor, M. Sagharichiha, K. J. Schmidt, J. Shi, E. Simone, D. Svatunek, M. Taddei, I. Tetko, D. Tolnai, S. Vahdatifar, J. Whitmer, D. C. F. Wieland, R. Willumeit-Römer, A. Züttel, B. Smit, Assessment of fine-tuned large language models for real-world chemistry and material science applications, Chemical Science 16, 670–684 (2025). [Open Access URL]
Dataset on GitHub.
Group(s): Corminboeuf, Smit / Project(s): P1, P2 - F. Bigi, S. Chong, M. Ceriotti, F. Grasselli, A prediction rigidity formalism for low-cost uncertainties in trained neural networks, Machine Learning: Science and Technology 5, 045018 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - M. F. Langer, S. N. Pozdnyakov, M. Ceriotti, Probing the effects of broken symmetries in machine learning, Machine Learning: Science and Technology 5, 04LT01 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - Y. Litman, V. Kapil, Y. M. Y. Feldman, D. Tisi, T. Belgusic, K. Fidanyan, G. Fraux, J. Higer, M. Kellner, T. E. Li, E. S. Pos, E. Stocco, G. Trenins, B. Hirshberg, M. Rossi, M. Ceriotti, i-PI 3.0: A flexible and efficient framework for advanced atomistic simulations, The Journal of Chemical Physics 161, 062504 (2024). [Open Access URL]
Dataset on GitHub.
Group(s): Ceriotti / Project(s): P2 - M. Balodis, Y. Rao, G. Stevanato, M. Kellner, J. Meibom, M. Negroni, B. F. Chmelka, L. Emsley, Observation of Transient Prenucleation Species of Calcium Carbonate by DNP-Enhanced NMR, The Journal of Physical Chemistry Letters 15, 7954–7961 (2024). [Open Access URL]
Group(s): Emsley / Project(s): P2 - F. Bigi, S. N. Pozdnyakov, M. Ceriotti, Wigner kernels: Body-ordered equivariant machine learning without a basis, The Journal of Chemical Physics 161, 044116 (2024). [Open Access URL]
Dataset on Zenodo.
Group(s): Ceriotti / Project(s): P2 - L. Clarté, A. Vandenbroucque, G. Dalle, B. Loureiro, F. Krzakala, L. Zdeborová, Analysis of Bootstrap and Subsampling in High-dimensional Regularized Regression, 244, 787–819 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Zdeborova / Project(s): P2 - L. Gigli, A. Goscinski, M. Ceriotti, G. A. Tribello, Modeling the ferroelectric phase transition in barium titanate with DFT accuracy and converged sampling, Physical Review B 110, 024101 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - P. van Gerwen, K. R. Briling, C. Bunne, V. R. Somnath, R. Laplaza, A. Krause, C. Corminboeuf, 3DReact: Geometric deep learning for chemical reactions, Journal of Chemical Information and Modeling 64, 5771–5785 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - D. Tisi, F. Grasselli, L. Gigli, M. Ceriotti, Thermal conductivity of Li3PS4 solid electrolytes with ab initio accuracy, Physical Review Materials 8, 065403 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - E. Gazzarrini, R. K. Cersonsky, M. Bercx, C. S. Adorf, N. Marzari, The rule of four: anomalous distributions in the stoichiometries of inorganic compounds, npj Computational Materials 10, 73 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Marzari / Project(s): P2 - A. Mazitov, M. A. Springer, N. Lopanitsyna, G. Fraux, S. De, M. Ceriotti, Surface segregation in high-entropy alloys from alchemical machine learning, JPhys Materials 7, 025007 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - G. Piccioli, E. Troiani, L. Zdeborová, Gibbs sampling the posterior of neural networks, Journal of Physics A: Mathematical and Theoretical 57, 125002 (2024). [Open Access URL]
Dataset on GitHub.
Group(s): Zdeborova / Project(s): P2 - F. Célerse, M. D. Wodrich, S. Vela, S. Gallarati, R. Fabregat, V. Juraskova, C. Corminboeuf, From Organic Fragments to Photoswitchable Catalysts: The OFF-ON Structural Repository for Transferable Kernel-Based Potentials, Journal of Chemical Information and Modeling 64, 1201–1212 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - E. Cignoni, D. Suman, J. Nigam, L. Cupellini, B. Mennucci, M. Ceriotti, Electronic Excited States from Physically Constrained Machine Learning, ACS Central Science 10, 637–648 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - L. Gigli, D. Tisi, F. Grasselli, M. Ceriotti, Mechanism of Charge Transport in Lithium Thiophosphate, Chemistry of Materials 36, 1482–1496 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - J. Nigam, S. N. Pozdnyakov, K. K. Huguenin-Dumittan, M. Ceriotti, Completeness of atomic structure representations, APL Machine Learning 2, 016110 (2024). [Open Access URL]
Dataset on Zenodo.
Group(s): Ceriotti / Project(s): P2 - K. R. Briling, Y. Calvino Alonso, A. Fabrizio, C. Corminboeuf, SPAHM(a,b): Encoding the density information from guess Hamiltonian in quantum machine learning representations, Journal of Chemical Theory and Computation 20, 1108–1117 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - Y. Cho, R. Laplaza, S. Vela, C. Corminboeuf, Automated prediction of ground state spin for transition metal complexes, Digital Discovery 3, 1638–1647 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - L. Clarté, L. Zdeborová, Building Conformal Prediction Intervals with Approximate Message Passing, arXiv:2410.16493(2024). [Open Access URL]
Group(s): Zdeborova / Project(s): P2 - M. Haeberle, P. van Gerwen, R. Laplaza, K. R. Briling, J. Weinreich, F. Eisenbrand, C. Corminboeuf, Integer linear programming for unsupervised training set selection in molecular machine learning, arXiv:2410.16122 (2024). [Open Access URL]
Group(s): Corminboeuf / Project(s): P2 - C. Malica, N. Marzari, Teaching oxidation states to neural networks, arXiv:2412.01652 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Marzari / Project(s): P2 - L. Monacelli, N. Marzari, Electrostatic interactions in atomistic and machine-learned potentials for polar materials, arXiv:2412.01642 (2024). [Open Access URL]
Group(s): Marzari / Project(s): P2 - J. Nys, G. Pescia, A. Sinibaldi, G. Carleo, Ab-initio variational wave functions for the time-dependent many-electron Schrödinger equation, Nature Communications 15, 9404 (2024). [Open Access URL]
Dataset on figshare.
Group(s): Carleo / Project(s): P2 - P. van Gerwen, K. R. Briling, Y. Calvino Alonso, M. Franke, C. Corminboeuf, Benchmarking machine-readable vectors of chemical reactions on computed activation barriers, Digital Discovery 3, 932–943 (2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - D. Wu, R. Rossi, F. Vicentini, N. Astrakhantsev, F. Becca, X. Cao, J. Carrasquilla, F. Ferrari, A. Georges, M. Hibat-Allah, M. Imada, A. M. Läuchli, G. Mazzola, A. Mezzacapo, A. Millis, J. R. Moreno, T. Neupert, Y. Nomura, J. Nys, O. Parcollet, R. Pohle, I. Romero, M. Schmid, J. M. Silvester, S. Sorella, L. F. Tocchio, L. Wang, S. R. White, A. Wietek, Q. Yang, Y. Yang, S. Zhang, G. Carleo, Variational benchmarks for quantum many-body problems, Science 386, 296–301 (2024). [Open Access URL]
Dataset on Zenodo.
Group(s): Carleo / Project(s): P2, QS - A. Zadoks, A. Marrazzo, N. Marzari, Spectral Operator Representations, npj Computational Materials 10, 278 (2024).[Open Access URL]
Dataset on Materials Cloud.
Group(s): Marzari / Project(s): P2 - S. Pozdnyakov, M. Ceriotti, Smooth, exact rotational symmetrization for deep learning on point clouds, 36, 79469–79501 (2023). [Open Access URL]
Dataset on Zenodo.
Group(s): Ceriotti / Project(s): P2
- K. R. Briling, Y. Calvino Alonso, A. Fabrizio, C. Corminboeuf, SPA^HM(a,b): Encoding the Density Information from Guess Hamiltonian in Quantum Machine Learning Representations, Journal of Chemical Theory and Computation(2024). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - J. T. Blaskovits, R. Laplaza, S. Vela, C. Corminboeuf, Data‐Driven Discovery of Organic Electronic Materials Enabled by Hybrid Top‐Down/Bottom‐Up Design, Advanced Materials 2023, 2305602 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - F. Bigi, G. Fraux, N. J. Browning, M. Ceriotti, Fast evaluation of spherical harmonics with sphericart, The Journal of Chemical Physics 159, 064802 (2023). [Open Access URL]
Dataset on GitHub.
Group(s): Ceriotti / Project(s): P2 - L. Clarté, B. Loureiro, F. Krzakala, L. Zdeborová, Expectation consistency for calibration of neural networks, 216, 443–453 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Zdeborova / Project(s): P2 - N. Lopanitsyna, G. Fraux, M. A. Springer, S. De, M. Ceriotti, Modeling high-entropy transition metal alloys with alchemical compression, Physical Review Materials 7, 045802 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - L. Clarté, B. Loureiro, F. Krzakala, L. Zdeborová, On double-descent in uncertainty quantification in overparametrized models, 206, 7089–7125 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Zdeborova / Project(s): P2 - R. K. Cersonsky, M. Pakhnova, E. A. Engel, M. Ceriotti, A data-driven interpretation of the stability of organic molecular crystals, Chemical Science 14, 1272–1285 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2, DD1 - A. C. P. Jain, M. Ceriotti, W. A. Curtin, Natural aging and vacancy trapping in Al-6xxx, Journal of Materials Research 38, 5171–5187 (2023). [Open Access URL]
Group(s): Ceriotti, Curtin / Project(s): P1, P2 - G. Pescia, J. Nys, J. Kim, A. Lovato, G. Carleo, Message-Passing Neural Quantum States for the Homogeneous Electron Gas, arXiv:2305.07240 (2023). [Open Access URL]
Group(s): Carleo / Project(s): P2 - A. Mazitov, M. A. Springer, N. Lopanitsyna, G. Fraux, S. De, M. Ceriotti, Surface segregation in high-entropy alloys from alchemical machine learning, arXiv:2310.07604 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - S. N. Pozdnyakov, M. Ceriotti, Smooth, exact rotational symmetrization for deep learning on point clouds, arXiv:2305.19302 (2023). [Open Access URL]
Group(s): Ceriotti / Project(s): P2 - L. Gigli, D. Tisi, F. Grasselli, M. Ceriotti, Mechanism of charge transport in lithium thiophosphate, arXiv:2310.15679(2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - E. Cignoni, D. Suman, J. Nigam, L. Cupellini, B. Mennucci, M. Ceriotti, Electronic excited states from physically-constrained machine learning, arXiv:2311.00844 (2023). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - J. Nigam, S. N. Pozdnyakov, K. K. Huguenin-Dumittan, M. Ceriotti, Completeness of Atomic Structure Representations, arXiv:2302.14770 (2023). [Open Access URL]
Dataset on Zenodo.
Group(s): Ceriotti / Project(s): P2 - L. Gigli, A. Goscinski, M. Ceriotti, G. A. Tribello, Modeling the ferroelectric phase transition in barium titanate with DFT accuracy and converged sampling, arXiv:2310.12579 (2023). [Open Access URL]
Group(s): Ceriotti / Project(s): P2 - P. van Gerwen, K. R. Briling, Y. Calvino Alonso, M. Franke, C. Corminboeuf, Benchmarking machine-readable vectors of chemical re- actions on computed activation barriers, ChemRxiv. Preprint. (2023). [Open Access URL]
Group(s): Corminboeuf / Project(s): P2
- M. Ceriotti, Beyond Potentials: Integrated Machine Learning Models for Materials, MRS Bulletin 47 (2022). [Open Access URL]
Group(s): Ceriotti / Project(s): P2 - R. Fabregat, A. Fabrizio, E. A. Engel, B. Meyer, V. Juraskova, M. Ceriotti, C. Corminboeuf, Local kernel regression and neural network approaches to the conformational landscapes of oligopeptides, Journal of Chemical Theory and Computation 18, 1467–1479 (2022). [Open Access URL]
Dataset on Zenodo.
Group(s): Ceriotti, Corminboeuf / Project(s): P2 - A. Fabrizio, K. R. Briling, C. Corminboeuf, SPAHM: the spectrum of approximated Hamiltonian matrices representations, Digital Discovery 1, 286–294 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - S. Gallarati, P. van Gerwen, R. Laplaza, S. Vela, A. Fabrizio, C. Corminboeuf, OSCAR: an extensive repository of chemically and functionally diverse organocatalysts, Chemical Science 13, 13782–13794 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2 - L. Gigli, M. Veit, M. Kotiuga, G. Pizzi, N. Marzari, M. Ceriotti, Thermodynamics and dielectric response of BaTiO3 by data-driven modeling, npj Computational Materials 8, 209 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti, Marzari, Pizzi / Project(s): P2, P3, P4 - B. A. Helfrecht, G. Pireddu, R. Semino, S. M. Auerbach, M. Ceriotti, Ranking the Synthesizability of Hypothetical Zeolites with the Sorting Hat, Digital Discovery 1, 779–789 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - H. J. Kulik, T. Hammerschmidt, J. Schmidt, S. Botti, M. A. L. Marques, M. Boley, M. Scheffler, M. Todorović, P. Rinke, C. Oses, A. Smolyanyuk, S. Curtarolo, A. Tkatchenko, A. P. Bartók, S. Manzhos, M. Ihara, T. Carrington, J. Behler, O. Isayev, M. Veit, A. Grisafi, J. Nigam, M. Ceriotti, K. T. Schütt, J. Westermayr, M. Gastegger, R. J. Maurer, B. Kalita, K. Burke, R. Nagai, R. Akashi, O. Sugino, J. Hermann, F. Noé, S. Pilati, C. Draxl, M. Kuban, S. Rigamonti, M. Scheidgen, M. Esters, D. Hicks, C. Toher, P. V. Balachandran, I. Tamblyn, S. Whitelam, C. Bellinger, L. M. Ghiringhelli, Roadmap on Machine Learning in Electronic Structure, Electronic Structure 4, 023004 (2022). [Open Access URL]
Group(s): Ceriotti / Project(s): P2 - C. B. Mahmoud, F. Grasselli, M. Ceriotti, Predicting hot-electron free energies from ground-state data, Physical Review B 106, L121116 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - J. Nigam, S. Pozdnyakov, G. Fraux, M. Ceriotti, Unified Theory of Atom-Centered Representations and Message-Passing Machine-Learning Schemes, The Journal of Chemical Physics 156, 204115 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Ceriotti / Project(s): P2 - S. N. Pozdnyakov, M. Ceriotti, Incompleteness of Graph Neural Networks for Points Clouds in Three Dimensions, Machine Learning: Science and Technology 3, 045020 (2022). [Open Access URL]
Group(s): Ceriotti / Project(s): P2 - P. van Gerwen, A. Fabrizio, M. Wodrich, C. Corminboeuf, Physics-based representations for machine learning properties of chemical reactions, Machine Learning: Science and Technology 3, 045005 (2022). [Open Access URL]
Dataset on Zenodo.
Group(s): Corminboeuf / Project(s): P2 - S. Vela, R. Laplaza, Y. Cho, C. Corminboeuf, cell2mol: encoding chemistry to interpret crystallographic data, npj Computational Materials 8, 188 (2022). [Open Access URL]
Dataset on Materials Cloud.
Group(s): Corminboeuf / Project(s): P2